PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010937085.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TCP
Protein Properties Length: 371aa    MW: 38831 Da    PI: 7.8031
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010937085.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP125.65.2e-3965221289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 
                     ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++  + s +ss+s+ s++       
  XP_010937085.1  65 PPKRSSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSVSAPshlraan 159
                     789******************************************************************99885556666655333334555567 PP

             TCP  89 .............................................................k 89 
                                                                                  +
  XP_010937085.1 160 yfssaaalaapplriggssflsegpsssssslllnfnsgsciaadtssdadigssirkrrwE 221
                     77777777777777777777777766666666666666666666666666666666665542 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.3E-3970237IPR005333Transcription factor, TCP
PROSITE profilePS5136927.92371125IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008283Biological Processcell proliferation
GO:0009735Biological Processresponse to cytokinin
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0010029Biological Processregulation of seed germination
GO:0010229Biological Processinflorescence development
GO:0031347Biological Processregulation of defense response
GO:0005634Cellular Componentnucleus
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MEGDAAGGSR RPNFPLQLLE KKEEDSCSSS GYPSLAISSG PSTAAGGSGG GGDHELAIDP  60
SRKPPPKRSS TKDRHTKVDG RGRRIRMPAL CAARVFQLTR ELGHKSDGET IEWLLQQAEP  120
AVIAATGTGT IPANFTSLNI SLRSSGSSVS APSHLRAANY FSSAAALAAP PLRIGGSSFL  180
SEGPSSSSSS LLLNFNSGSC IAADTSSDAD IGSSIRKRRW EQELHHHHLQ QQQQQQQQQP  240
VQHQMAGYSQ QASHGQMPGT LWMVTNPNSQ SIASGESLWT FPQVGSAAMF RGSMSSGLHF  300
MNFPTPMALL PSQQLGLGSA GAGGPPEGHM GILAALNAYR PPNSSEPMAP AGSQQAHGGG  360
DRHDTMSTSD S
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00396DAPTransfer from AT3G47620Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010937085.10.0PREDICTED: transcription factor TCP15-like
SwissprotQ93Z009e-59TCP14_ARATH; Transcription factor TCP14
TrEMBLM0TII61e-117M0TII6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P17990_0011e-116(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37443479
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.16e-37TCP family protein